Who am I? I am a 2nd year PhD student at Inria Rennes lab’ (FR), at the GenScale team I am working on genome assembly and scaffolding. For this purpose, I am implementing graphs’ algorithms and graphs’ structures, and formalise these problems thanks to linear programming. Work colleagues PhD Inria main superviser: Rumen Andonov PhD INRAe main superviser: Jean-François Gibrat PhD second superviser: Dominique Lavenier Some links Twitter: https://twitter.com/VictorEpain LinkedIn: https://www.linkedin.com/in/victor-epain-b280b5183 GitLab: https://gitlab.com/vepain GitHub: https://github.com/vepain Contact Inria laboratory e-mail: victor.epain(replace_by_at)irisa.fr Professional out of Inria lab’: victor.epain(replace_by_at)laposte.net You can find my CV below partitioned into several categories. Accepted Talks 2022 ROADEF2022 chairman for bioinformatic session short abstract titled Linear integer programming approach for chloroplast genome scaffolding talk JOBIM2022 proceeding titled Optimal Scaffolding for Chloroplasts’ Inverted Repeats (accepted) talk DSB2022 short abstract titled “The reverse complement symmetry advantage of DNA fragments relationships for their storage in a directed graph” talk 2021 BiATA2021 extended abstract titled Optimal de novo assemblies for chloroplast genomes based on inverted repeats patterns talk SeqBIM2021 Lyon short abstract titled The advantage of DNA reads overlaps’ reverse complement symmetry for their storage in an oriented graph talk Rejected Talks 2022 ISCO2022 (not accepted) proceeding WABI2022 (not accepted) proceeding titled Inverted Repeats Scaffolding for a Dedicated Chloroplast Genome Assembler Teaching 2021 Algorithmic Methods for Graph Third year Bachelor (INFO & MIAGE) exercices lectures: 40h Operational Research First year Master (MIAGE) practical tutorial: 12h Algorithmic for Bioinformatic Second year Master (Bioinformatic) magistral lecture: 2h exercices lectures: 4h practical tutorial: 6h 2020 Algorithmic Methods for Graph Third year Bachelor (INFO & MIAGE) exercices lectures: 40h Operational Research First year Master (MIAGE) practical tutorial: 12h Collaborations 2021-2022 Heinrich Heine University Düsseldorf from December 2021 to January 2022 ALBI team, welcomed by Gunnar Klau Laboratory life 2022 Data Knowledge Management IRISA/Inria Department organisation of monthly department seminar organisation of departments days (1.
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