Je suis un doctorant de 3ème année au laboratoire Inria de l’Université de Rennes (FR), dans l’équipe GenScale.
Je travaille actuellement sur l’assemblage de génome et du scaffolding. Pour résoudre ces problématiques, j’implémente des algorithmes sur des structures de graphes, et je formalise ces problèmes grâce à la programmation linéaire.
I also play the piano. You can find here some improvisations ;)
👤 Work colleagues
- PhD Inria main superviser Rumen Andonov
- PhD INRAe main superviser Jean-François Gibrat
- PhD second superviser Dominique Lavenier
🔗 Some links
- Mastodon @vepain@sciences.re (to be prefered)
- Twitter @VictorEpain
- GitLab @vepain (to be prefered)
- GitHub vepain
- Piano @ProfesseurChep
📫 Contact
- Inria laboratory e-mail
victor.epain(replace_by_at)irisa.fr - Professional out of Inria lab’
victor.epain(replace_by_at)laposte.net
You can find my CV below partitioned into several categories.
🗣️ 📰 Accepted Talks & Papers
2022
- ROADEF2022
- chairman for bioinformatic session
- short abstract: Linear integer programming approach for chloroplast genome scaffolding
- talk
- JOBIM2022
- proceeding: Optimal Scaffolding for Chloroplasts’ Inverted Repeats
- talk
- DSB2022
- short abstract: The reverse complement symmetry advantage of DNA fragments relationships for their storage in a directed graph
- talk
2021
- BiATA2021
- extended abstract: Optimal de novo assemblies for chloroplast genomes based on inverted repeats patterns
- talk
- SeqBIM2021 Lyon
🏫 Teaching
2021
Algorithmic Methods for Graph
- Third year Bachelor (INFO & MIAGE)
- exercises lectures: 40h
Operational Research
- First year Master (MIAGE)
- practical tutorial: 12h
Algorithmic for Bioinformatic
- Second year Master (Bioinformatic)
- lecture: 2h
- exercises lectures: 4h
- practical tutorial: 6h
2020
Algorithmic Methods for Graph
- Third year Bachelor (INFO & MIAGE)
- exercises lectures: 40h
Operational Research
- First year Master (MIAGE)
- practical tutorial: 12h
👥 Collaborations
2021-2022
- Heinrich Heine University Düsseldorf from December 2021 to January 2022
- ALBI team, welcomed by Gunnar Klau
🥼 Responsabilités Collectives
2023
- Nicomaque PhD association
- Treasurer
2022
- Data Knowledge Management IRISA/Inria Department
- organisation of monthly department seminar
- organisation of departments days (1.5 days)
- JOBIM2022 french national conference
- referent organiser for social activity
- Organisation of internship oral training for the first and second Master degrees students
2021
- Organisation of internship oral training for the second Master degree students
- Supervisor of Pauline Hamon-Giraud (first Master degree student in bioinformatic)
💬 Vulgarisation
2022
- Organisation of PhD vulgarisation film festival Sciences en Cour[t]s
- the recorded event (FR)
- collaboration with Espace des Sciences for the Fête de la Science
2021
- Sciences en Cour[t]s
- making a 5min animated film: Cocktail de bio-informatique (FR) for PhD vulgarisation film festival
📑 Working Papers
2022
- Overlap Graph for Assembling and Scaffolding Algorithms: Paradigm Review and Implementation Proposals
- N.b.: used as a try of a thesis chapter
- see revsymg software page for more information
💀 Rejected Talks & Papers
🪶 Succeeding is not a magic process, humanism suggest humans are perfectible: papers too!